ywkD

168

unknown

locus: BSU_37020

Molecular weight: 14.69 kDa

pI: 5.41

Protein length: 128 aa

Gene length: 387 bp

function: unknown

product: unknown

essential: no

synonyms: ywkD

List of homologs in different organisms, belongs to COG0346 (Galperin et al., 2021)

Gene

Coordinates: 3,798,281  3,798,667

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The protein

[wiki|Domains]

• [wiki|VOC domain] (aa 5-128) (according to UniProt)

Structure

• [PDB|2P25] (from Enterococcus faecalis, 54% identity)
• [AF|P45871]

Expression and Regulation

Operons

• genes: [gene|81CCDC33856F2F8BC59BCC7FED34015340D21C48|ywkD]-[gene|09E9194E82DF199527F414DB0EC15547A71AD25E|racA]

  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B654 (ywkD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1653 NBRP B. subtilis, Japan]
• BKE37020 ([gene|81CCDC33856F2F8BC59BCC7FED34015340D21C48|ywkD]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE37020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCATCCCTCCTCGAATTC,  downstream forward: _UP4_TAACAGTTTTTGAAGAAAAA
• BKK37020 ([gene|81CCDC33856F2F8BC59BCC7FED34015340D21C48|ywkD]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK37020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCATCCCTCCTCGAATTC,  downstream forward: _UP4_TAACAGTTTTTGAAGAAAAA