ywcJ

168

similar to nitrate channel

Locus: BSU_38060

Molecular weight: 28.31 kDa

Isoelectric point: 7.68

Protein length: 256 aa

Gene length: 771 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ywcJ, ipa-48r

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG2116 (Galperin et al., 2021)

Gene

Coordinates: 3,905,333  3,906,103

The protein

Protein family

• FNT transporter (TC 2.A.44) family (with YrhG, according to UniProt)

Structure

• 3TDP (PDB) (from Clostridium difficile, 36% identity) PubMed
• P39608 (AlphaFold)

Paralogous protein(s)

• YrhG

Localization

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• Genes: ywcJ

  Description: PubMed

  Regulatory mechanism

  • Rex: repression, PubMed, in rex regulon

Biological materials

Mutant

• MGNA-B672 (ywcJ::erm), available at the NBRP B. subtilis, Japan
• BKE38060 (ywcJ::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTGTCTTTTCCTGCTTTC,  downstream forward: _UP4_TAAAAAAACTTCCAGAGATC
• BKK38060 (ywcJ::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTGTCTTTTCCTGCTTTC,  downstream forward: _UP4_TAAAAAAACTTCCAGAGATC

References

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