yvbX

168

putative glycoside hydrolase

locus: BSU_34020

Molecular weight: 38.79 kDa

pI: 9.93

Protein length: 344 aa

Gene length: 1035 bp

function: unknown

product: unknown

essential: no

synonyms: yvbX

List of homologs in different organisms, belongs to COG3858 (Galperin et al., 2021)

Gene

Coordinates: 3,491,655 → 3,492,689

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The protein

Protein family

• [wiki|Glycosyl hydrolase 18 family] (according to UniProt)

[wiki|Domains]

• [wiki|glycoside hydrolase family 18 domain] (aa 25 to 344)

Structure

• [PDB|5JH8] (from Chromobacterium violaceum, 34% identity)
• [AF|O32258]

Biological materials

Mutant

• MGNA-A469 (yvbX::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/469 NBRP B. subtilis, Japan]
• BKE34020 (Δ[gene|DAB047D274936832345F3DCB675768E30B5077CF|yvbX]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE34020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCGCATTTCCTCCTGTAT,  downstream forward: _UP4_TAACAGTTTCTTTTTTCTCT
• BKK34020 (Δ[gene|DAB047D274936832345F3DCB675768E30B5077CF|yvbX]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK34020 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCGCATTTCCTCCTGTAT,  downstream forward: _UP4_TAACAGTTTCTTTTTTCTCT