yvaF

168

Uncharacterized HTH-type transcriptional regulator

locus: BSU_33580

Molecular weight: 21.85 kDa

pI: 4.7

Protein length: 190 aa

Gene length: 573 bp

function: unknown

product: unknown

essential: no

synonyms: yvaF

List of homologs in different organisms, belongs to COG1309 (Galperin et al., 2021)

Gene

Coordinates: 3,449,049  3,449,621

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The protein

[wiki|Domains]

• [wiki|HTH tetR-type domain] (aa 1-58) (according to UniProt)

Structure

• [AF|O32228]

Expression and Regulation

Operons

• genes: [gene|97CE9735931D02E6E780C955C9BE3A67E5C4C59A|yvaF]-[gene|230D790937DAFB82A04B8597699115E1C1EAE98E|yvaE]-[gene|B7FBC30B744D8B1F26AFC5DCB297FAFAB5C60FB7|yvaD]

  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-A446 (yvaF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/446 NBRP B. subtilis, Japan]
• BKE33580 ([gene|97CE9735931D02E6E780C955C9BE3A67E5C4C59A|yvaF]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE33580 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATTAATCCCCCGCTTTC,  downstream forward: _UP4_GCTGATGAGGAGGCTGATGC
• BKK33580 ([gene|97CE9735931D02E6E780C955C9BE3A67E5C4C59A|yvaF]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK33580 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATATTAATCCCCCGCTTTC,  downstream forward: _UP4_GCTGATGAGGAGGCTGATGC