yugU

yugU
168

general stress protein, survival of ethanol and paraquat stresses

locus
BSU_31280
Molecular weight
16.17 kDa
pI
6.59
Protein length
Gene length
function
survival of stress conditions
product
unknown
essential
no
synonyms
yugU

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0432 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,213,854  3,214,252
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The protein
Protein family
UPF0047 family (single member, according to UniProt)
Structure
[PDB|1VMH] (the protein from ''Clostridium acetobutylicum'', 54% identity, 83% similarity)
[AF|O05243]
Expression and Regulation
Operons
genes
[gene|A4BF42889C55566ACE702561E34109F184413B85|yugU]-[gene|561B400C0255AAC2B52ADBBCA05D373E6366CD40|yuzH]
description
[pubmed|22383849]
regulatory mechanism
[protein|90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|spoIIID]: repression, [Pubmed|15383836], in [regulon|protein:90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|spoIIID regulon]
sigma factors
[protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB]: sigma factor, [Pubmed|26577401], in [regulon|protein:580011DE5DC40EC9E7E0512791D328FAA010DCB8|sigB regulon]
[protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE]: sigma factor, [Pubmed|15383836], in [regulon|protein:3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE regulon]
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[gene|A4BF42889C55566ACE702561E34109F184413B85|yugU]->[gene|561B400C0255AAC2B52ADBBCA05D373E6366CD40|yuzH]

2024-02-20 13:03:13

Bzhu

33

6a36d9ebead8f27f8ac513db5ea3cf0de47b924c

97CF83808AB7C45728D5D7AEF660EE65F9A164B0

Biological materials
Mutant
MGNA-A616 (yugU::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/616 NBRP B. subtilis, Japan]
BKE31280 ([gene|A4BF42889C55566ACE702561E34109F184413B85|yugU]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE31280 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTGTTTCTCCTTTCGTT,  downstream forward: _UP4_TAATAGGCTGTTTTTTATGA
BKK31280 ([gene|A4BF42889C55566ACE702561E34109F184413B85|yugU]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK31280 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTGTTTCTCCTTTCGTT,  downstream forward: _UP4_TAATAGGCTGTTTTTTATGA
References
15805528,22582280

A4BF42889C55566ACE702561E34109F184413B85

Page visits: 2043

Time of last update: 2024-03-28 14:10:22

Author of last update: Melvin.boenninger