yrzB

yrzB
168

unknown

locus
BSU_27380
Molecular weight
10.68 kDa
pI
3.32
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
yrzB

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG3906 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,797,100  2,797,381
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The protein
Protein family
UPF0473 family (single member, according to UniProt)
Structure
[AF|O34828]
Expression and Regulation
Operons
genes
[gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]-[gene|508FC7117B4CE7AF119B3830AE9DC113CB058039|yrrK]-[gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]
description
[pubmed|22383849]
Open in new tab

[gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]->[gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]

2024-01-29 20:18:27

Bzhu

41

13604f7ff8a332a31b3eeac85d34d0390bab5a6b

A0B9F1DCCECD01642A67F9491E3DE8A7C80DD674

genes
[gene|8C5C7F9A585AE89D53EAF1DB3A9AB525B9E30B4A|alaS]-[gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]-[gene|508FC7117B4CE7AF119B3830AE9DC113CB058039|yrrK]-[gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]
description
[pubmed|22383849]
regulation
induced by alanine limitation ([regulon|T-box|]) [Pubmed|19258532]
regulatory mechanism
T-box: RNA switch, [pubmed|], in [regulon|other_regulator:T-box|T-box]
Open in new tab

[gene|8C5C7F9A585AE89D53EAF1DB3A9AB525B9E30B4A|alaS]->[gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]

2024-03-19 16:38:23

Bzhu

81

1fe3dcf0db8626f9ee3da1f804086613bec215b9

F35CA2CD94C7D88BA9469B9BEE16089909E658A6

additional information
the mRNA belongs to the 46 most abundant mRNA species in dormant spores [pubmed|30782632]
Biological materials
Mutant
MGNA-A855 (yrzB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/855 NBRP B. subtilis, Japan]
BKE27380 ([gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE27380 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTCTTCACCTCTGGCT,  downstream forward: _UP4_TAAAACATCGCGCCAAACCA
BKK27380 ([gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK27380 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTCTTCACCTCTGGCT,  downstream forward: _UP4_TAAAACATCGCGCCAAACCA
References
Reviews
36882621
Original Publications
36815589,30782632

A0AA5289F5E92A4B2E18E4F3439F2D412208826E

Page visits: 1354

Time of last update: 2024-03-27 03:13:44

Author of last update: Jstuelk