yplP

yplP
168

transcriptional activator (for [protein|1118A21CC581B0470EC6E7C178F2523CDCA70F93|sigL]-dependent promoter)

locus
BSU_21780
Molecular weight
37.05 kDa
pI
9.3
Protein length
Gene length
function
required for survival at low temperatures
product
transcriptional activator (for [protein|1118A21CC581B0470EC6E7C178F2523CDCA70F93|sigL]-dependent promoter)
essential
no
synonyms
yplP

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1221 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,294,286  2,295,281
Phenotypes of a mutant
The mutant is cold-sensitive [http://www.ncbi.nlm.nih.gov/sites/entrez/16585774  PubMed]
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The protein
Protein family
[wiki|Transcription factors activating transcription at SigL-dependent promoters]
[wiki|Domains]
[wiki|Sigma-54 factor interaction domain] (aa 12-213) (according to UniProt)
Structure
[PDB|3DZD] (Aquifex aeolicus NtrC, corresponds to aa 12 ... 333 of YplP, 33% identity) [pubmed|18955063]
[AF|P54156]
Expression and Regulation
Operons
genes
[gene|90C747D6D6194608C2CF9566F1740A6B20966A11|yplP]-[gene|8C382ECBEE4E2911E0233E0882BEA754156B9D40|trhA]
description
[Pubmed|22383849]
Open in new tab

[gene|90C747D6D6194608C2CF9566F1740A6B20966A11|yplP]→[gene|8C382ECBEE4E2911E0233E0882BEA754156B9D40|trhA]

2024-02-25 11:40:23

Jstuelk

57

f216a396ba3a87299a9a6732a1f3cd744febe3c5

D0BB11612A56A88FD81DFC40D14AAE50504F0532

Biological materials
Mutant
MGNA-A896 (yplP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/896 NBRP B. subtilis, Japan]
GP2304 ( ''yplP''::aphA3), available in [wiki|Jörg Stülke]'s lab
BKE21780 ([gene|90C747D6D6194608C2CF9566F1740A6B20966A11|yplP]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE21780 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCAATTGGCTCCTTTTGG,  downstream forward: _UP4_TAGCGATCGAAAGGAGAATG
BKK21780 ([gene|90C747D6D6194608C2CF9566F1740A6B20966A11|yplP]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK21780 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCAATTGGCTCCTTTTGG,  downstream forward: _UP4_TAGCGATCGAAAGGAGAATG
References
16585774,12399512,21906631,18955063

90C747D6D6194608C2CF9566F1740A6B20966A11

Page visits: 2778

Time of last update: 2024-03-27 14:57:07

Author of last update: Melvin.boenninger