yocR

yocR
168

similar to sodium-dependent transporter

locus
BSU_19340
Molecular weight
48.17 kDa
pI
9.59
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
yocR

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0733 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,104,934 → 2,106,271
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The protein
Protein family
sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family (with [protein|FF16BA2B744E89AADB00F936B9A50A82726312A7|yhdH], according to UniProt)
Structure
[PDB|4US4] (the protein from ''B. halodurans'', 45% identity, 77% similarity) [Pubmed|25282149]
[AF|O34383]
Paralogous protein(s)
[protein|FF16BA2B744E89AADB00F936B9A50A82726312A7|yhdH]
[wiki|Localization]
membrane associated [Pubmed|18763711]
Expression and Regulation
Operons
genes
[gene|D5A30C841A142B49C50A38936802D0F60485DD7C|yocR]
description
[Pubmed|22383849]
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[gene|D5A30C841A142B49C50A38936802D0F60485DD7C|yocR]

2024-02-24 12:26:14

ghost

28

66b7e4d9b48cdbe000e31b205443e6b7f96b0f8f

DC76D27DE084C25F482C20DF25917DB6095789B3

Biological materials
Mutant
MGNA-B419 (yocR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1418 NBRP B. subtilis, Japan]
BKE19340 (Δ[gene|D5A30C841A142B49C50A38936802D0F60485DD7C|yocR]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE19340 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CACCGTATCACTCCTATTTG,  downstream forward: _UP4_TAACACACGAAGCCCCCGAG
BKK19340 (Δ[gene|D5A30C841A142B49C50A38936802D0F60485DD7C|yocR]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK19340 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CACCGTATCACTCCTATTTG,  downstream forward: _UP4_TAACACACGAAGCCCCCGAG
References
18763711,25282149

D5A30C841A142B49C50A38936802D0F60485DD7C

Page visits: 1736

Time of last update: 2024-03-28 19:02:14

Author of last update: Melvin.boenninger