ykoP

168

unknown

locus: BSU_13360

Molecular weight: 21.47 kDa

pI: 10.37

Protein length: 183 aa

Gene length: 552 bp

function: unknown

product: unknown

essential: no

synonyms: ykoP

List of homologs in different organisms

Gene

Coordinates: 1,400,188  1,400,739

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The protein

Structure

• [AF|O34495]

Expression and Regulation

Operons

• genes: [gene|6BF3B54666B92C93FAEC09AE36CA83CD2A957515|S477]-[gene|018E9DEFC7BF236E0163D1945FC7AD07531063E8|ykoP]

  description: [pubmed|22383849]

  regulatory mechanism

  • [protein|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur]: repression, [Pubmed|12354229], in [regulon|protein:F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|fur regulon]
  • [protein|1E829D639BADDC6BDC9B5FB4C97A632A53FDDB24|resD]: activation, [Pubmed|24214949], in [regulon|protein:1E829D639BADDC6BDC9B5FB4C97A632A53FDDB24|resD regulon]
  • [protein|EC6697D5D945B7E5083AFED9218748763C443278|nsrR]: repression, [Pubmed|24214949], in [regulon|protein:EC6697D5D945B7E5083AFED9218748763C443278|nsrR regulon]
  • [protein|65E2F7197D46F5C884CC96018EE4F3EEE94FFA18|kre]: repression, in [regulon|protein:65E2F7197D46F5C884CC96018EE4F3EEE94FFA18|kre regulon]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA]: sigma factor, [Pubmed|12354229], in [regulon|protein:360F48D576DE950DF79C1A2677B7A35A8D8CC30C|sigA regulon]

Biological materials

Mutant

• MGNA-A761 (ykoP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/761 NBRP B. subtilis, Japan]
• BKE13360 ([gene|018E9DEFC7BF236E0163D1945FC7AD07531063E8|ykoP]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE13360 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTCACCTTCCTTAT,  downstream forward: _UP4_TGATGCCTCGGTCAGCACAG
• BKK13360 ([gene|018E9DEFC7BF236E0163D1945FC7AD07531063E8|ykoP]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK13360 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTCACCTTCCTTAT,  downstream forward: _UP4_TGATGCCTCGGTCAGCACAG

References

• 12354229,12107147,24214949,26110430