ykaA

ykaA
168

unknown

locus
BSU_12850
Molecular weight
23.70 kDa
pI
4.91
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
ykaA

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1392 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,350,482 → 1,351,099
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The protein
Protein family
UPF0111 family (single member, according to UniProt)
Structure
[PDB|3L39] (from Bacteroides thetaiotamicron, 28% identity)
[AF|O34454]
Expression and Regulation
Operons
genes
[gene|BBA93C5BAA044DA61A2D1E0EE850A12391E8A3E3|ykaA]-[gene|BBFA6A5EE16CE6203AF89573F87678395277C9E8|pit]
description
[Pubmed|22383849]
regulation
repressed under conditions that trigger sporulation ([wiki|Spo0A]) [Pubmed|14651647]
regulatory mechanism
[protein|2C54FE2ADC82FF414D732018C90649D477A925AD|spo0A]: repression, [Pubmed|14651647], in [regulon|protein:2C54FE2ADC82FF414D732018C90649D477A925AD|spo0A regulon]
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[gene|BBA93C5BAA044DA61A2D1E0EE850A12391E8A3E3|ykaA]→[gene|BBFA6A5EE16CE6203AF89573F87678395277C9E8|pit]

2024-03-20 13:37:09

Jstuelk

39

2ed1877d9dfaff66f8b42e50fd3374707efbf2e3

310EECD78ADFC2787122CD7693BA45E418C873FE

Biological materials
Mutant
MGNA-B307 (ykaA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1306 NBRP B. subtilis, Japan]
BKE12850 (Δ[gene|BBA93C5BAA044DA61A2D1E0EE850A12391E8A3E3|ykaA]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE12850 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTAAAAACCCTCCATAGT,  downstream forward: _UP4_TAACGAGGGGTAAAAATGGA
BKK12850 (Δ[gene|BBA93C5BAA044DA61A2D1E0EE850A12391E8A3E3|ykaA]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK12850 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTAAAAACCCTCCATAGT,  downstream forward: _UP4_TAACGAGGGGTAAAAATGGA
References
Reviews
36882621
Original Publications
14651647

BBA93C5BAA044DA61A2D1E0EE850A12391E8A3E3

Page visits: 1775

Time of last update: 2024-03-29 02:37:09

Author of last update: Jstuelk