yisR

168

similar to transcription factor ([wiki|AraC family])

locus: BSU_10830

Molecular weight: 33.05 kDa

pI: 7.38

Protein length: 287 aa

Gene length: 864 bp

function: unknown

product: unknown

essential: no

synonyms: yisR, yuxC, yucF

List of homologs in different organisms, belongs to COG2207 (Galperin et al., 2021)

Gene

Coordinates: 1,162,267  1,163,130

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The protein

Protein family

• [wiki|AraC family]

[wiki|Domains]

• [wiki|HTH araC/xylS-type domain] (aa 183-281) (according to UniProt)

Structure

• [PDB|2K9S] (E. coli AraC, corresponds to aa 184 ... 279, 30% identity) [pubmed|19422057]
• [AF|P40331]

Expression and Regulation

Operons

• genes: [gene|5B173B400D0B4C150E94A98D35E27B0B4358489B|yisR]-[gene|17F5188958A415D8D09439E02E1D1E0661B5C760|iolQ]

  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-B212 (yisR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1211 NBRP B. subtilis, Japan]
• BKE10830 ([gene|5B173B400D0B4C150E94A98D35E27B0B4358489B|yisR]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE10830 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTGAATCATCCTCCTTT,  downstream forward: _UP4_CAATAACCAGACGAGGGATG
• BKK10830 ([gene|5B173B400D0B4C150E94A98D35E27B0B4358489B|yisR]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK10830 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTGAATCATCCTCCTTT,  downstream forward: _UP4_CAATAACCAGACGAGGGATG

References

• 23504016,19422057