ydgG

168

similar to transcriptional regulator (MarR family)

Locus: BSU_05640

Molecular weight: 17.13 kDa

Isoelectric point: 5.62

Protein length: 152 aa

Gene length: 459 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ydgG

Genomic Context

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Categories containing this gene/protein

Information processing, Regulation of gene expression, Transcription factors and their control, Transcription factor/ other/ based on similarity

List of homologs in different organisms, belongs to COG1846 (Galperin et al., 2021)

This gene is a member of the following regulons

LexA regulon

Gene

Coordinates: 608,933  609,391

The protein

Protein family

MarR family

Domains

HTH marR-type domain (aa 3-143) (according to UniProt)

Structure

P96705 (AlphaFold)

Expression and Regulation

Operons

Genes: ydgG-ydgH

Description: PubMed

Regulation

induced by DNA damage (LexA) PubMed

Regulatory mechanism

LexA: repression, PubMed, in lexA regulon

Biological materials

Mutant

MGNA-C160 (ydgG::erm), available at the NBRP B. subtilis, Japan
CS209 (''ydgG::aphA3'', available in Colin Harwood's and Jörg Stülke's labs) PubMed
BKE05640 (ydgG::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAATATCTTCCCCTCCTCAT,  downstream forward: _UP4_TTTAAAGGAGGAGATTCTGC
BKK05640 (ydgG::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAATATCTTCCCCTCCTCAT,  downstream forward: _UP4_TTTAAAGGAGGAGATTCTGC

References

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