ydeQ

168

similar to NAD(P)H oxidoreductase

locus: BSU_05300

Molecular weight: 22.69 kDa

pI: 6.06

Protein length: 197 aa

Gene length: 594 bp

function: unknown

product: unknown

essential: no

synonyms: ydeQ

List of homologs in different organisms, belongs to COG2249 (Galperin et al., 2021)

Gene

Coordinates: 576,209  576,802

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The protein

Protein family

• NAD(P)H dehydrogenase (quinone) family (with [protein|E8048E181756BCE307CF28CF31664421404748A4|ywrO] and [protein|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL], according to UniProt)

[wiki|Cofactors]

• FMN or FAD [Pubmed|21635694]

Structure

• [PDB|5LVA] (from Streptomyces violaceus, 55% identity) [pubmed|27714222]
• [AF|P96674]

Paralogous protein(s)

• [protein|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL], [protein|E8048E181756BCE307CF28CF31664421404748A4|ywrO]

Expression and Regulation

Operons

• genes: [gene|2782BD764716CF5FAD0988284310CF75508F2286|ydeQ]

  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-C138 (ydeQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2136 NBRP B. subtilis, Japan]
• BKE05300 ([gene|2782BD764716CF5FAD0988284310CF75508F2286|ydeQ]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE05300 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTCCTTTCATTCCTTAGA,  downstream forward: _UP4_TAAAGATTGATTTTTGAAAA
• BKK05300 ([gene|2782BD764716CF5FAD0988284310CF75508F2286|ydeQ]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK05300 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTCCTTTCATTCCTTAGA,  downstream forward: _UP4_TAAAGATTGATTTTTGAAAA

References

Research papers

• 27714222