yddQ

yddQ
168

similar to isochorismatase

locus
BSU_05070
Molecular weight
19.78 kDa
pI
5.69
Protein length
Gene length
function
unknown
product
unknown
essential
no
ec
[pubmed|22350524]
synonyms
yddQ

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1335 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
552,616 → 553,158
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The protein
Protein family
[wiki|Isochorismatase family] (according to UniProt)
Structure
[PDB|3LQY] (from Oleispira antarctica, 47% identity) [pubmed|22350524]
[AF|P96654]
Paralogous protein(s)
[protein|CF663A76026F915FFE38EE924C7E354A49607F90|yrdC]
Biological materials
Mutant
MGNA-C125 (yddQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2123 NBRP B. subtilis, Japan]
BKE05070 ([gene|5CE3A1F611563E09B3C4657E56397F44F39209B3|yddQ]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE05070 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTTTCACCTCTTAAAA,  downstream forward: _UP4_TAAAAGAATTTCCTGCGCGA
BKK05070 ([gene|5CE3A1F611563E09B3C4657E56397F44F39209B3|yddQ]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK05070 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTTTTCACCTCTTAAAA,  downstream forward: _UP4_TAAAAGAATTTCCTGCGCGA
References
Research papers
22350524

5CE3A1F611563E09B3C4657E56397F44F39209B3

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Time of last update: 2024-03-27 11:25:49

Author of last update: Melvin.boenninger