ydbP

168

similar to thioredoxin

Locus: BSU_04550

Molecular weight: 12.29 kDa

Isoelectric point: 4.39

Protein length: 106 aa

Gene length: 321 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: ydbP

Genomic Context

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List of homologs in different organisms, belongs to COG3118 (Galperin et al., 2021)

Gene

Coordinates: 507,753  508,073

The protein

Protein family

• Thioredoxin family (according to UniProt)

Domains

• Thioredoxin domain (aa 1-106) (according to UniProt)

Structure

• 4RUV (PDB) (from Staphylococcus aureus, 57% identity)
• P96611 (AlphaFold)

Paralogous protein(s)

• TrxA

Localization

• cytoplasm (according to UniProt)

Expression and Regulation

Operons

• Genes: ydbP

  Description: PubMed

Biological materials

Mutant

• MGNA-C109 (ydbP::erm), available at the NBRP B. subtilis, Japan
• BKE04550 (ydbP::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATATGTCACATCTCCTTTT,  downstream forward: _UP4_ATAAGCTAATTCGTTAAACA
• BKK04550 (ydbP::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATATGTCACATCTCCTTTT,  downstream forward: _UP4_ATAAGCTAATTCGTTAAACA

References

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