ybfI

168

similar to transcription factor ([wiki|AraC family])

locus: BSU_02220

Molecular weight: 32.29 kDa

pI: 6.1

Protein length: 275 aa

Gene length: 828 bp

function: unknown

product: unknown

essential: no

synonyms: ybfI

List of homologs in different organisms, belongs to COG2207 (Galperin et al., 2021)

Gene

Coordinates: 242,834  243,661

The protein

Protein family

• [wiki|AraC family]

[wiki|Domains]

• [wiki|HTH araC/xylS-type domain] (aa 171-268) (according to UniProt)

Structure

• [AF|O31449]

Expression and Regulation

Operons

• genes: [gene|0AD208CFDA10F7BED022583C8448EFA7E37B9E33|ybfI]-[gene|5084B6223B9F261E9FE1C65CD3F5FE20AF7E5ECE|ybfH]

  description: [Pubmed|22383849]

Biological materials

Mutant

• GP4423 (Δ[gene|0AD208CFDA10F7BED022583C8448EFA7E37B9E33|ybfI]::''neo''), available in [wiki|Jörg Stülke]'s lab
• MGNA-B970 (ybfI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1969 NBRP B. subtilis, Japan]
• BKE02220 ([gene|0AD208CFDA10F7BED022583C8448EFA7E37B9E33|ybfI]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE02220 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGGGATGCCTCCTGTCGG,  downstream forward: _UP4_ATTTTTGAAAAGGAGCTTCA
• BKK02220 ([gene|0AD208CFDA10F7BED022583C8448EFA7E37B9E33|ybfI]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK02220 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGGGATGCCTCCTGTCGG,  downstream forward: _UP4_ATTTTTGAAAAGGAGCTTCA

References

• 23504016