ybaJ

168

similar to [metabolite|SAM]-dependent mrthlytransferase

locus: BSU_01510

Molecular weight: 28.20 kDa

pI: 4.94

Protein length: 255 aa

Gene length: 768 bp

function: unknown

product: unknown

essential: no

synonyms: ybaJ

List of homologs in different organisms, belongs to COG2227 (Galperin et al., 2021)

Gene

Coordinates: 155,156  155,923

The protein

Protein family

• [wiki|Methyltransferase superfamily] (according to UniProt)

Structure

• [PDB|8K76] (from Fusobacterium nucleatum, 41.6% identity)
• [AF|P70976]

Expression and Regulation

Operons

• genes: [gene|A482C4C416093F544945340296AC803E08090414|ybaJ]

  description: [pubmed|22383849]

  regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|20817675], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]

Biological materials

Mutant

• MGNA-B946 (ybaJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1945 NBRP B. subtilis, Japan]
• BKE01510 ([gene|A482C4C416093F544945340296AC803E08090414|ybaJ]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE01510 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGAATCTTCTCCTTACTT,  downstream forward: _UP4_TGAAAAGCAGCGACCTGTTA
• BKK01510 ([gene|A482C4C416093F544945340296AC803E08090414|ybaJ]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK01510 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATGAATCTTCTCCTTACTT,  downstream forward: _UP4_TGAAAAGCAGCGACCTGTTA

References

• 20817675