xkdA

xkdA
168

PBSX prophage

locus
BSU_12500
Molecular weight
23.38 kDa
pI
6.69
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
xkdA, ykxA

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2856 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,320,570  1,321,166
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The protein
Structure
[AF|P39780]
Expression and Regulation
Operons
genes
[gene|8FDB136793B51BB646755D507F6C2631D4769D1B|xkdA]
description
[Pubmed|16267290]
regulation
induced upon DNA damage ([protein|search|LexA]) [Pubmed|16267290]
regulatory mechanism
[protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|lexA]: repression, [Pubmed|16267290], in [regulon|protein:D267AF38B0CF107042326E9B8F3DD3C9C85840E4|lexA regulon]
sigma factors
[protein|7024E4162A6D827069F882FDEACA696EBC05DD40|sigD]: sigma factor, [Pubmed|26577401], in [regulon|protein:7024E4162A6D827069F882FDEACA696EBC05DD40|sigD regulon]
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[gene|8FDB136793B51BB646755D507F6C2631D4769D1B|xkdA]

2024-02-19 15:59:05

ghost

46

ad043d96d799fb41a022ec235b529095988557a0

7F42337045761645501928D78E850913B0F619E5

Biological materials
Mutant
BKE12500 ([gene|8FDB136793B51BB646755D507F6C2631D4769D1B|xkdA]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE12500 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAATTGAATACTCCCTTTCG,  downstream forward: _UP4_TGATCAAATACGGGCTGAGG
BKK12500 ([gene|8FDB136793B51BB646755D507F6C2631D4769D1B|xkdA]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK12500 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CAATTGAATACTCCCTTTCG,  downstream forward: _UP4_TGATCAAATACGGGCTGAGG
References
16267290,26577401

8FDB136793B51BB646755D507F6C2631D4769D1B

Page visits: 1735

Time of last update: 2024-03-28 23:47:10

Author of last update: Bzhu