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Potential protein homologs

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Potential protein homologs


The following list presents the potential protein homologs for RlmCD using FASTA alignment tool. For all top hits, a bidirectional analysis was performed and those showing the same pair of proteins are considered to be potential orthologs.
The column Best hit bidirectional informs if RlmCD was found to be best hit in the alignment with the protein of the respective organism.


OrganismProtein nameIdentitySimilarityBidirectional
best hit
Bacillus licheniformisYefA88.6%97.2%Yes
Bacillus anthracisBAS031873.9%92.5%Yes
Listeria monocytogenesCAC9982957.6%86.0%Yes
Staphylococcus aureusSAOUHSC_0211349.9%79.2%Yes
Lactococcus lactisYljE43.4%73.9%Yes
Streptococcus pneumoniaeSpr093242.3%76.2%Yes
Streptococcus pyogenesGGS_126343.8%75.3%Yes
Clostridium acetobutylicumCA_C052352.8%81.2%Yes
Mycoplasma pneumoniaeMPN_36236.4%70.9%No
Corynebacterium glutamicumBAB9929622.6%53.2%Yes
Streptomyces coelicolorCAA1643827.3%57.0%Yes
Escherichia coliRlmC27.4%55.6%Yes
Synechocystis sp.BAA1740535.5%69.8%Yes
Synechococcus elongatusSynpcc7942_024135.6%70.5%Yes
Borrelia burgdorferi No significant homolog No significant homolog