SubtiWiki SubtiWiki
yrdR
The European Conference @BACELL 2021 will be held 26th - 27th August in Prague - please register until the 20th of July, for more information see the conference website!

The 21st International Conference on Bacilli has been postponed to 2022 and will take place in Prague.

yrdR
168

unknown

locus
BSU_26620
Molecular weight
35.76 kDa
pI
9.97
Protein length
Gene length
function
unknown
product
unknown
essential
no
ec
null
synonyms
yrdR

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0697

This gene is a member of the following regulons

Gene
Coordinates
2,720,687 → 2,721,652
The protein
Protein family
[wiki|EamA transporter family] (according to UniProt)
[wiki|Domains]
2 [wiki|EamA domain]s (aa 18-146, aa 175-300) (according to UniProt)
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|F47A2C0A7478485BDAF90FA873F4B1D1F7C74004|yrdR]-[gene|4E42C126368C8995971518F33933D39FFD52BF64|yrzO]
description
[pubmed|22383849]
sigma factors
[protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF]: sigma factor, [pubmed|30782632], in [regulon|protein:CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|sigF regulon]
[protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|sigG]: sigma factor, [pubmed|30782632], in [regulon|protein:5F24258282F3166B7696B9E9ABC1706E4D06C944|sigG regulon]
Open in new tab

[gene|F47A2C0A7478485BDAF90FA873F4B1D1F7C74004|yrdR]→[gene|4E42C126368C8995971518F33933D39FFD52BF64|yrzO]

2021-07-17 10:16:35

Bzhu

2

f5e8eeb8edcdf1a01bf169172d60652bf980e7da

C596F70DF90BF503D6EC0DFE195EF95B0F69793F

Biological materials
Mutant
MGNA-A860 (yrdR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/860 NBRP B. subtilis, Japan]
BKE26620 (Δ[gene|F47A2C0A7478485BDAF90FA873F4B1D1F7C74004|yrdR]::erm  trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE26620 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTGAATTCCCCTCCTTTT,  downstream forward: _UP4_ACTTAGACAGTGGGGGATTT
BKK26620 (Δ[gene|F47A2C0A7478485BDAF90FA873F4B1D1F7C74004|yrdR]::kan  trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK26620 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTGAATTCCCCTCCTTTT,  downstream forward: _UP4_ACTTAGACAGTGGGGGATTT

F47A2C0A7478485BDAF90FA873F4B1D1F7C74004

Page visits: 870

Time of last update: 2021-08-21 11:16:34

Author of last update: Melvin.boenninger