ykoM
168
similar to transcriptional regulator ([wiki|MarR family])
locus
BSU_13340
Molecular weight
17.72 kDa
pI
9.47
function
unknown
product
unknown
essential
no
synonyms
ykoM
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1846 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
1,398,496 1,398,960
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The protein
[wiki|Domains]
[wiki|HTH marR-type domain] (aa 14-146) (according to UniProt)
Structure
[PDB|3ZPL] (from Steptomyces coelicolor, corresponds to aa 17 ... 142, 24.6% identity) [pubmed|23748564]
[AF|O34949]
Paralogous protein(s)
[protein|997B828A99D6D8460712C18ED0CE566B285C22DC|mhqR]
Expression and Regulation
Operons
genes
[gene|A703CA58365926CFE6BFC1C4A0B1DA22C67C85AC|ykoM]
description
[pubmed|22383849]
Biological materials
Mutant
BKE13340 ([gene|A703CA58365926CFE6BFC1C4A0B1DA22C67C85AC|ykoM]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE13340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCTACCTCGTATATAG, downstream forward: _UP4_TTTCGTTAACTATTCTACAC
BKK13340 ([gene|A703CA58365926CFE6BFC1C4A0B1DA22C67C85AC|ykoM]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK13340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCTACCTCGTATATAG, downstream forward: _UP4_TTTCGTTAACTATTCTACAC
GP2873 (''[gene|A703CA58365926CFE6BFC1C4A0B1DA22C67C85AC|ykoM]''::''zeo''), available in [wiki|Jörg Stülke]'s lab
References
Research papers
Page visits: 1938
Time of last update: 2024-04-19 15:28:05
Author of last update: Melvin.boenninger