2019-02-19 19:22:382025-05-27 21:47:53
locus
BSU23860
BSU_23860
outlinks
bsu
BSU23860
BSU_23860
The protein
Catalyzed reaction/ biological activity
6-phospho-D-gluconate + NADP+ = D-ribulose 5-phosphate + CO2 + NADPH (according to Swiss-Prot)
6-phospho-D-gluconate + NADP+ --> CO2 + D-ribulose 5-phosphate + NADPH (according to UniProt)
The protein
Protein family
6-phosphogluconate dehydrogenase family (according to Swiss-Prot)
6-phosphogluconate dehydrogenase family (with [[protein|YqeC]] and [[protein|GntZ]], according to UniProt)
The protein
Structure
[PDB|2W8Z] (from ''Geobacillus stearothermophilus'', 83% identity, 92% similarity) [Pubmed|19407374]
[PDB|2W8Z] (from ''Geobacillus stearothermophilus'', 83% identity, 92% similarity) [Pubmed|19407374]
Biological materials
Mutant
MGNA-C391 (yqjI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2389 NBRP B. subtilis, Japan]
GP1514 (''gndA''::''kan''), available in [SW|Jrg Stlke]'s lab
BKE23860 ([[gene|gndA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTCTAACGTCCCTTCT, downstream forward: _UP4_TAATCAATAGAAACCCCCGA
BKK23860 ([[gene|gndA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTCTAACGTCCCTTCT, downstream forward: _UP4_TAATCAATAGAAACCCCCGA
MGNA-C391 (yqjI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2389 NBRP B. subtilis, Japan]
GP1514 (''gndA''::''kan''), available in [SW|Jörg Stülke]'s lab
BKE23860 ([[gene|gndA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTCTAACGTCCCTTCT, downstream forward: _UP4_TAATCAATAGAAACCCCCGA
BKK23860 ([[gene|gndA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTCTAACGTCCCTTCT, downstream forward: _UP4_TAATCAATAGAAACCCCCGA
Biological materials
Expression vectors
pGP1777 (for expression, purification in ''E. coli'' with N-terminal Strep-tag, in [SW|pGP172], available in [SW|Jrg Stlke]'s lab)
pGP1789 (N-terminal Strep-tag, for [SW|SPINE], purification from ''B. subtilis'', in [SW|pGP1389]) (available in [SW|Jrg Stlke]'s lab)
GP1408 (''gndA''-''Strep'' ''(spc)'') & GP1410 (''gndA''-''Strep'' ''(cat)''), purification from ''B. subtilis'', for [SW|SPINE], available in [SW|Jrg Stlke]'s lab
pGP1777 (for expression, purification in ''E. coli'' with N-terminal Strep-tag, in [SW|pGP172], available in [SW|Jörg Stülke]'s lab)
pGP1789 (N-terminal Strep-tag, for [SW|SPINE], purification from ''B. subtilis'', in [SW|pGP1389]) (available in [SW|Jörg Stülke]'s lab)
GP1408 (''gndA''-''Strep'' ''(spc)'') & GP1410 (''gndA''-''Strep'' ''(cat)''), purification from ''B. subtilis'', for [SW|SPINE], available in [SW|Jörg Stülke]'s lab
Biological materials
two-hybrid system
''B. pertussis'' adenylate cyclase-based bacterial two hybrid system ([SW|BACTH]), available in [SW|Jrg Stlke]'s lab
''B. pertussis'' adenylate cyclase-based bacterial two hybrid system ([SW|BACTH]), available in [SW|Jörg Stülke]'s lab
Biological materials
FLAG-tag construct
GP1403 (spc, based on [SW|pGP1331]), available in [SW|Jrg Stlke]'s lab
GP1408 (kan, resistance cassette exchange in GP1403), available in [SW|Jrg Stlke]'s lab
GP1403 (spc, based on [SW|pGP1331]), available in [SW|Jörg Stülke]'s lab
GP1408 (kan, resistance cassette exchange in GP1403), available in [SW|Jörg Stülke]'s lab
Biological materials
Antibody
**
References
The protein
Effectors of protein activity
inhibited by 4-phosphoerythronate (results from oxidation of erythrose-4-phosphate) [pubmed|30948730]