SubtiBank SubtiBank
yogA [2018-09-26 09:22:09]
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yogA [2018-09-26 09:22:09]

similar to alcohol dehydrogenase
locus
BSU18430
pI
8.05
mw
35.66 kDa
protein length
329 aa Sequence Blast
gene length
987 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,007,526 → 2,008,515

    The protein

    Structure

  • [PDB|2EIH] (36% identity)

    • Additional information

  • The gene is annotated in KEGG as an ortholog of alcohol dehydrogenase EC 1.1.1.1. No annotation is available in Swiss-Prot. The protein is marked in MetaCyc as “similar to alcohol dehydrogenase”. No evidence supporting the annotation is available. [Pubmed|19935659]

    • Expression and Regulation

    Operons

    genes
    [gene|F9DC5EEF3E9BA8F04F401A183340C475B9058B38|yogA]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B088 (yogA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1087 NBRP B. subtilis, Japan]
  • BKE18430 (Δ[gene|F9DC5EEF3E9BA8F04F401A183340C475B9058B38|yogA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18430 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCTGTCTGCCTCCTCAT, downstream forward: _UP4_TAAAAAAAGAAACCGGCTGG
  • BKK18430 (Δ[gene|F9DC5EEF3E9BA8F04F401A183340C475B9058B38|yogA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18430 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCTGTCTGCCTCCTCAT, downstream forward: _UP4_TAAAAAAAGAAACCGGCTGG

    • References

  • 22383849