SubtiBank SubtiBank
gerPD
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

gerPD

spore germination protein, facilitates access of nutrient germinants to their cognate germinant receptors in spores’ inner membrane
locus
BSU_10690
pI
3.97
mw
6.13 kDa
protein length
58 aa Sequence Blast
gene length
177 bp Sequence Blast
function
germination
product
unknown
essential
no
synonyms
yisE
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.4|Germination] → [category|SW 4.2.4.2|Additional germination proteins]

    • Gene

    Coordinates
    1,149,145 → 1,149,321

    Expression and Regulation

    Operons

    genes
    [gene|C4DA51243A4249B2489133C8EF0F8A30B05F4C86|gerPA]-[gene|B52A09BF195FE8E143FCB2EF5EBA53454A4ED3D5|gerPB]-[gene|2C49C261D2C7EEDD8E01A384917B63B6965B4AB9|gerPC]-[gene|F8658BB6D52793F8EC289FEC652241D729D72BF6|gerPD]-[gene|53833A2E7176C04AF2E3F7CD7FC9928DC1A0110D|gerPE]-[gene|C2DDBBD801BC61B89024198624360CC55D208247|gerPF]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|15699190], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]

    • regulatory mechanism

  • [protein|19228BAD44E6DA3DE908DC390FDF628C18D94E65|GerE]: repression, in [regulon|19228BAD44E6DA3DE908DC390FDF628C18D94E65|GerE regulon]

    • regulation

  • expressed during sporulation in the mother cell ([protein|search|SigK]) [Pubmed|15699190,10715007]

    • additional information

  • A [protein|search|ncRNA] is predicted between '[protein|search|gerPA]' and '[protein|search|yisI]' [PubMed|20525796]
    • view in new tab

    Biological materials

    Mutant

  • BKE10690 (Δ[gene|F8658BB6D52793F8EC289FEC652241D729D72BF6|gerPD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10690 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GCTGCGGTTGATGACTGTAA, downstream forward: _UP4_TTTGCTCCGCTTGCGCCAGA
  • BKK10690 (Δ[gene|F8658BB6D52793F8EC289FEC652241D729D72BF6|gerPD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10690 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GCTGCGGTTGATGACTGTAA, downstream forward: _UP4_TTTGCTCCGCTTGCGCCAGA

    • References

  • 10715007,27766092