SubtiBank SubtiBank
yozO
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yozO

unknown
locus
BSU_19290
pI
8.44
mw
13.00 kDa
protein length
114 aa Sequence Blast
gene length
345 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • Gene

    Coordinates
    2,099,446 → 2,099,790

    The protein

    Structure

  • [PDB|3DCX] (from Shewanella loihica, 32% identity) [pubmed|19913036]
  • Expression and Regulation

    Operons

    genes
    [gene|F2037CBE540F5D57FA93E3504960C771A55DC29C|yozO]
    description
    [Pubmed|11866510]

    sigma factors

  • [protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW]: sigma factor, [Pubmed|11866510], in [regulon|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW regulon]
  • regulation

  • induced by alkali shock ([protein|search|SigW]) [Pubmed|11866510]
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    Biological materials

    Mutant

  • MGNA-B418 (yozO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1417 NBRP B. subtilis, Japan]
  • BKE19290 (Δ[gene|F2037CBE540F5D57FA93E3504960C771A55DC29C|yozO]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19290 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATGAAGAACCCCTCTTTC, downstream forward: _UP4_TGAATATTTGATGAGCCAGC
  • BKK19290 (Δ[gene|F2037CBE540F5D57FA93E3504960C771A55DC29C|yozO]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19290 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATGAAGAACCCCTCTTTC, downstream forward: _UP4_TGAATATTTGATGAGCCAGC
  • References

  • 11866510,19913036