SubtiBank SubtiBank
ratA
Save the date! 20th International Conference on Bacilli and Gram-Positive Bacteria. Washington, D.C. July 23-26, 2019.

ratA

part of type I toxin/antitoxin system, control of TxpA toxin expression
locus
new_2678362_2678577_c
pI
0.00
mw
0.00 kDa
gene length
216 bp Sequence Blast
function
control of txpA toxin expression
product
antitoxin RNA
synonyms
S976
Outlinks

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.17|Toxins, antitoxins and immunity against toxins] → [category|SW 4.3.17.1|Type 1 TA systems]
  • [category|SW 6|Groups of genes] → [category|SW 6.9|NcRNA] → [category|SW 6.9.6|Antisense RNAs of toxin/antitoxin systems]
  • Gene

    Coordinates
    2,678,362 → 2,678,577

    RNA

    Catalyzed reaction/ biological activity

  • binds the ''[gene|2A6EE9A3A5B32554E87E356B8BD4E2ED7975429A|txpA]'' mRNA and triggers its degradation [Pubmed|16166525]
  • Expression and Regulation

    Operons

    genes
    [gene|53714CE39C840B69F94ED8C25737A5BD1840852F|bsrH]-[gene|EF79E525504B99CE40B2BD0EE0BB8F8A2E9C7F7B|ratA]
    description
    [pubmed|22383849]

    regulatory mechanism

  • [protein|9C8FFBC92A69E969906ABE17FC5A448F95D55C90|As-bsrH]: antisense RNA, [pubmed|], in [regulon|9C8FFBC92A69E969906ABE17FC5A448F95D55C90|As-bsrH regulon]
  • view in new tab

    References

    Reviews

  • 23300472
  • Original publications

  • 16166525,23300471,27450630