SubtiBank SubtiBank
yaaO [Tue Dec 13 2016 11:16:29 GMT+0100 (CET)]
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yaaO [Tue Dec 13 2016 11:16:29 GMT+0100 (CET)]

similar to arginine decarboxylase
locus
BSU00270
pI
5.00
mw
52.00 kDa
function
unknown
product
putative arginine decarboxylase
essential
no
ec
4.1.1.19
synonyms

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.14|Translation factor modification and maturation]
  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.4|Protein modification] → [category|SW 3.3.4.8|Protein modification/ other]
  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]
  • [SW|Categories] containing this gene/protein

  • [SW|poorly characterized/ putative enzymes]
  • This gene is a member of the following [SW|regulons]

  • [SW|SigW regulon], [SW|SigK regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    37,720 -> 39,162

    The protein

    Catalyzed reaction/ biological activity

  • the protein was reported to be involved in norspermidine production and biofilm disassembly [Pubmed|22541437]; however, this is not the case [Pubmed|24529384] and the original paper has been [http://www.cell.com/cell/fulltext/S0092-8674(15)00495-X retracted]
  • Protein family

  • Orn/Lys/Arg decarboxylase class-I family (according to Swiss-Prot)
  • Paralogous protein(s)

  • [protein|search|SpeA]
  • Structure

  • [PDB|2X3L] (from ''Staphylococcus aureus'', 36% identity) [Pubmed|20419351]
  • Expression and Regulation

    Operon

  • ''[protein|search|xpaC]-[protein|search|yaaN]-[protein|search|yaaO]'' [Pubmed|22383849]
  • [SW|Sigma factor]

  • [protein|search|SigW] [Pubmed|9987136], [protein|search|SigK] [Pubmed|22383849]
  • References

  • 24529384,20876533,22541437,22383849,9987136,20419351