SubtiBank SubtiBank
yfhE
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yfhE

general stress protein, survival of salt, ethanol and paraquat stresses and low temperatures
locus
BSU_08500
pI
10.57
mw
4.14 kDa
protein length
36 aa Sequence Blast
gene length
111 bp Sequence Blast
function
survival of stress conditions and low temperatures
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.8|Resistance against oxidative and electrophile stress]

    • Gene

    Coordinates
    924,468 → 924,578

    Expression and Regulation

    Operons

    genes
    [gene|B2924DAA879FBE56EB8DF9A7C60222AA1EE5526C|yfhF]-[gene|EE8065E719D0359B5892C8DCBCEC0B246ABE7D5B|yfhE]-[gene|29A9F7EEC3EFD8CA913877C41C1F00BCE9FF384D|yfhD]
    description
    [Pubmed|27965289]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]
  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|15699190], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]
  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|15699190], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

    • regulation

  • expressed early during sporulation in the forespore ([protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]) [Pubmed|15699190]

    • additional information

  • An [ncRNA|search|antisense RNA] is predicted for '[protein|29A9F7EEC3EFD8CA913877C41C1F00BCE9FF384D|YfhD]' [PubMed|20525796]
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    Biological materials

    Mutant

  • MGNA-C360 (yfhE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2358 NBRP B. subtilis, Japan]
  • BKE08500 (Δ[gene|EE8065E719D0359B5892C8DCBCEC0B246ABE7D5B|yfhE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAAGGACCTCCTTCA, downstream forward: _UP4_TAGGAATACATAGCCCCTTA
  • BKK08500 (Δ[gene|EE8065E719D0359B5892C8DCBCEC0B246ABE7D5B|yfhE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAAGGACCTCCTTCA, downstream forward: _UP4_TAGGAATACATAGCCCCTTA

    • References

  • 15805528,15699190,22582280