ywoC

unknown

locus: BSU_36490

pI: 4.62

mw: 20.97 kDa

protein length: 189 aa

gene length: 570 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]

Gene

Coordinates: 3,755,291 → 3,755,860

The protein

Protein family

• [SW|Isochorismatase family] (according to UniProt)

Structure

• [PDB|1J2R] (from E. coli, 46% identity)

Expression and Regulation

Operons

• genes: [gene|42FD1230682897172C3D4EA09980E566835EEF34|ywoB]-[gene|ECBA7A0C8E705A464ACF627EBAFF7482EAEE34F2|ywoC]-[gene|856247843F1073833D51F82AB2928CCDC0DA3E64|ywoD]
  description: [Pubmed|21856850]

  sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|21856850], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

  regulatory mechanism

  • [protein|6A074CE9AD98A2751A216A2EA8156ACE6FFC7280|YtrA]: repression, [Pubmed|21856850], in [regulon|6A074CE9AD98A2751A216A2EA8156ACE6FFC7280|YtrA regulon]

  regulation

  • induced by ramoplanin ([protein|search|YtrA]) [Pubmed|21856850]

Biological materials

Mutant

• MGNA-A932 (ywoC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/932 NBRP B. subtilis, Japan]
• BKE36490 (Δ[gene|ECBA7A0C8E705A464ACF627EBAFF7482EAEE34F2|ywoC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE36490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACGTCTCCTCCTGATAC, downstream forward: _UP4_GAGTTTCTGGAACAAGTGAA
• BKK36490 (Δ[gene|ECBA7A0C8E705A464ACF627EBAFF7482EAEE34F2|ywoC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK36490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACGTCTCCTCCTGATAC, downstream forward: _UP4_GAGTTTCTGGAACAAGTGAA