SubtiBank SubtiBank
ywnJ
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ywnJ

unknown
locus
BSU_36540
pI
8.44
mw
15.93 kDa
protein length
140 aa Sequence Blast
gene length
423 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • Gene

    Coordinates
    3,759,169 → 3,759,591

    The protein

    [SW|Localization]

  • cell membrane (according to UniProt)
  • Expression and Regulation

    Operons

    genes
    [gene|E44811DF107D3761550E68F270E29B9E465D434D|ywnJ]
    description
    [Pubmed|12399481]

    sigma factors

  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|16497325], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]
  • [protein|081DF3EE9FA56209D648C7677188C61CE3AA8E41|SigM]: sigma factor, [Pubmed|18179421], in [regulon|081DF3EE9FA56209D648C7677188C61CE3AA8E41|SigM regulon]
  • [protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW]: sigma factor, [Pubmed|14762009], in [regulon|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW regulon]
  • [protein|E77364F274A520FCCA9F5C9504E317B047BA29E6|SigX]: sigma factor, [Pubmed|14762009], in [regulon|E77364F274A520FCCA9F5C9504E317B047BA29E6|SigX regulon]
  • regulation

  • expressed during sporulation in the forespore ([protein|search|SigF]) [Pubmed|16497325,15699190]
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    Biological materials

    Mutant

  • MGNA-A210 (ywnJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/210 NBRP B. subtilis, Japan]
  • BKE36540 (Δ[gene|E44811DF107D3761550E68F270E29B9E465D434D|ywnJ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE36540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGACATAACCTCCTTTAT, downstream forward: _UP4_TAAAGCCGGCTGTCTTGATT
  • BKK36540 (Δ[gene|E44811DF107D3761550E68F270E29B9E465D434D|ywnJ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK36540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGACATAACCTCCTTTAT, downstream forward: _UP4_TAAAGCCGGCTGTCTTGATT
  • References

  • 14762009,16497325,12399481,18179421