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yceD [2018-05-28 18:10:42]
general stress protein, similar to tellurium resistance protein
function
required for survival of ethanol stress
Genomic Context
categories
[category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)][category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.12|Resistance against toxic metals/ based on similarity][category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)][category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]Gene
Coordinates
312,780 → 313,361
The protein
Protein family
CAPAB/terDEXZ family (according to Swiss-Prot)Paralogous protein(s)
[protein|7E4742F30B4C43FBF9DAE0B02948022AE7912A33|YceC], [protein|863E26D497D29B820912A0C0F4A3AE4C6865EC2E|YceE] Structure
[PDB|2KXT] (from Klebsiella pneumoniae, 59% identity)[SW|Localization]
membrane associated [Pubmed|18763711]Biological materials
Mutant
MGNA-B984 (yceD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1983 NBRP B. subtilis, Japan]BKE02900 (Δ[gene|DF30A8B195B8D830E131B23C768F07BE61F51150|yceD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02900 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTCATCCACTCCTTT, downstream forward: _UP4_TAAGACAAATACGAAGAGCABKK02900 (Δ[gene|DF30A8B195B8D830E131B23C768F07BE61F51150|yceD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02900 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTCATCCACTCCTTT, downstream forward: _UP4_TAAGACAAATACGAAGAGCAReferences
15805528,18763711,11866510,18179421,19047346