SubtiBank SubtiBank
yfiV
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yfiV

similar to transcriptional regulator ([SW|MarR family])
locus
BSU_08410
pI
6.52
mw
18.07 kDa
protein length
160 aa Sequence Blast
gene length
483 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    916,124 → 916,606

    The protein

    [SW|Domains]

  • [SW|HTH marR-type domain] (aa 20-152) (according to UniProt)

    • Structure

  • [PDB|6JBX] (from Streptococcus pneumoniae, corresponds to aa 46 ... 158, 28% identity) [pubmed|31291684]

    • Expression and Regulation

    Operons

    genes
    [gene|DE880F5577B6D86B2E62437E392D48AFA9BCE48B|yfiV]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-C357 (yfiV::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2355 NBRP B. subtilis, Japan]
  • BKE08410 (Δ[gene|DE880F5577B6D86B2E62437E392D48AFA9BCE48B|yfiV]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATCACTTCCTCATC, downstream forward: _UP4_TAAATCAGTAAGTCTGTCAT
  • BKK08410 (Δ[gene|DE880F5577B6D86B2E62437E392D48AFA9BCE48B|yfiV]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATCACTTCCTCATC, downstream forward: _UP4_TAAATCAGTAAGTCTGTCAT

    • References

    Research papers

  • 31291684