SubtiBank SubtiBank
ykuC [2019-06-07 10:12:07]
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ykuC [2019-06-07 10:12:07]

similar to macrolide-efflux protein
locus
BSU14030
pI
9.92
mw
47.93 kDa
protein length
430 aa Sequence Blast
gene length
1293 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.14|Resistance against toxins/ antibiotics/ based on similarity]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • Gene

    Coordinates
    1,475,150 → 1,476,442

    Phenotypes of a mutant

  • increased conjugation of ICEBs1 [Pubmed|25069588]
  • The protein

    Protein family

  • [SW|major facilitator superfamily] (according to UniProt)
  • [SW|Localization]

  • cell membrane (according to Swiss-Prot)
  • Expression and Regulation

    Operons

    genes
    [gene|253A24EEA02C07E577A96FB64DF39F9A3D0C3A52|ykuE]-[gene|6F256986E591DB82974A7F54EB1CE0C024A6F63B|ldt]-[gene|DDAE68CD8D7F0D9C46E62D0EDBF4631C9EC4C236|ykuC]
    description
    [Pubmed|22383849]

    regulation

  • expressed during sporulation in the mother cell ([protein|search|SigK]) [Pubmed|11011148]
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    Biological materials

    Mutant

  • MGNA-A765 (ykuC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/765 NBRP B. subtilis, Japan]
  • BKE14030 (Δ[gene|DDAE68CD8D7F0D9C46E62D0EDBF4631C9EC4C236|ykuC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAACGCTCCTTACCC, downstream forward: _UP4_TAATGCAGGTTAAAAATGCG
  • BKK14030 (Δ[gene|DDAE68CD8D7F0D9C46E62D0EDBF4631C9EC4C236|ykuC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAACGCTCCTTACCC, downstream forward: _UP4_TAATGCAGGTTAAAAATGCG
  • References

  • 22383849,25069588