ycgE

similar to transcription regulator

locus: BSU_03080

pI: 8.45

mw: 17.10 kDa

protein length: 155 aa

gene length: 465 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates: 334,092 → 334,556

The protein

[SW|Domains]

• [SW|HTH marR-type domain] (aa 7-143) (according to UniProt)

Structure

• [PDB|4XRF] (from B. cereus, corresponds to aa 34 ... 136, 32.2% identity)

Expression and Regulation

Operons

• genes: [gene|D948867BAEF91943250714453A474B90AB64E523|ycgE]-[gene|78B3F9580DED32469ACF537F4B40C7DBF0D4D995|ycgF]-[gene|CBEC4D299232FC5FCB57211525404CBD42D5AF68|ycgG]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-C049 (ycgE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2047 NBRP B. subtilis, Japan]
• BKE03080 (Δ[gene|D948867BAEF91943250714453A474B90AB64E523|ycgE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE03080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACTGACAGTCCTCCCTAT, downstream forward: _UP4_TAAGTGAATTTGTGCATAGC
• BKK03080 (Δ[gene|D948867BAEF91943250714453A474B90AB64E523|ycgE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK03080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAACTGACAGTCCTCCCTAT, downstream forward: _UP4_TAAGTGAATTTGTGCATAGC