SubtiBank SubtiBank
yobD
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yobD

similar to transcription regulator (Xre family)
locus
BSU_18850
pI
9.15
mw
12.83 kDa
protein length
112 aa Sequence Blast
gene length
339 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    2,056,278 → 2,056,616

    The protein

    Protein family

  • [SW|Xre family]

    • [SW|Domains]

  • [SW|HTH cro/C1-type domain] (aa 6-60) (according to UniProt)

    • Biological materials

    Mutant

  • MGNA-B403 (yobD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1402 NBRP B. subtilis, Japan]
  • BKE18850 (Δ[gene|D600D3F369E9EB8BF49D17BFD0D813BFD114F6B0|yobD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18850 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAATAAATGCCTCC, downstream forward: _UP4_TAAAAAAGCCCTCATAAGGG
  • BKK18850 (Δ[gene|D600D3F369E9EB8BF49D17BFD0D813BFD114F6B0|yobD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18850 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAATAAATGCCTCC, downstream forward: _UP4_TAAAAAAGCCCTCATAAGGG

    • References

  • 23504016