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rocF [Mon May 16 2016 17:51:08 GMT+0200 (CEST)]
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rocF [Mon May 16 2016 17:51:08 GMT+0200 (CEST)]

arginase
locus
BSU40320
pI
4.00
mw
32.00 kDa
function
arginine utilization
product
arginase
essential
no
ec
3.5.3.1
synonyms
RocF

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.3|Amino acid/ nitrogen metabolism] → [category|SW 2.3.2|Utilization of amino acids] → [category|SW 2.3.2.4|Utilization of arginine/ ornithine]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.5|Phosphorylation on a Ser residue]
  • [SW|Categories] containing this gene/protein

  • [SW|utilization of amino acids]
  • This gene is a member of the following [SW|regulons]

  • [SW|AhrC regulon], [SW|CodY regulon], [SW|RocR regulon], [SW|SigL regulon], [SW|Spo0A regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    4,141,711 -> 4,142,601

    The protein

    Catalyzed reaction/ biological activity

  • L-arginine H2O = L-ornithine urea (according to Swiss-Prot)
  • Protein family

  • arginase family (according to Swiss-Prot)
  • Modification

  • phosphorylated on Ser-68 [Pubmed|20509597]
  • Structure

  • [PDB|2CEV] (from ''Bacillus caldevelox'', 71% identity) [Pubmed|10196128]
  • Expression and Regulation

    Operon

  • ''[protein|search|rocD]-[protein|search|rocE]-[protein|search|rocF]'' [Pubmed|7540694]
  • [SW|Sigma factor]

  • [protein|search|SigL] [Pubmed|7540694]
  • Regulation

  • induced by arginine ([protein|search|RocR], [protein|search|AhrC]) [Pubmed|7540694]
  • repressed under conditions that trigger sporulation ([SW|Spo0A]) [Pubmed|14651647]
  • repressed during growth in the presence of branched chain amino acids ([protein|search|CodY]) [Pubmed|12618455]
  • Regulatory mechanism

  • [protein|search|RocR], [protein|search|AhrC]: transcription activation [Pubmed|7540694]
  • [SW|Spo0A]: transcription repression [Pubmed|14651647]
  • [protein|search|CodY]: transcription repression [Pubmed|12618455]
  • Biological materials

    Mutant

  • GP655, aphA3, available in the [SW|Stülke] lab
  • References

  • 12618455,20509597,14651647,12618455,7540694,23625224,10196128