SubtiBank SubtiBank
reoM [2020-06-02 15:51:17]
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reoM [2020-06-02 15:51:17]

unknown
locus
BSU_27400
pI
4.73
mw
10.10 kDa
protein length
gene length
267 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
yrzL

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.5|Cell wall/ other]
  • Gene

    Coordinates
    2,797,823 → 2,798,089

    The protein

    Protein family

  • UPF0297 family (single member, according to UniProt)
  • Structure

  • [PDB|5US5] (from Enterococcus faecalis, 66% identity) [pubmed|28551334]
  • Expression and Regulation

    Operons

    genes
    [gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]-[gene|508FC7117B4CE7AF119B3830AE9DC113CB058039|yrrK]-[gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]
    description
    [pubmed|22383849]
    view in new tab

    genes
    [gene|8C5C7F9A585AE89D53EAF1DB3A9AB525B9E30B4A|alaS]-[gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]-[gene|508FC7117B4CE7AF119B3830AE9DC113CB058039|yrrK]-[gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]
    description
    [pubmed|22383849]

    regulatory mechanism

  • [regulon|T-box|T-box]: antitermination, in [regulon|T-box|T-box]
  • regulation

  • induced by alanine limitation ([regulon|T-box|T-box]) [Pubmed|19258532]
  • view in new tab

    Biological materials

    Mutant

  • BKE27400 (Δ[gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCGTTTTGCACCTCTTTC, downstream forward: _UP4_CAGCATAAAGAGGCGTAAAT
  • BKK27400 (Δ[gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCGTTTTGCACCTCTTTC, downstream forward: _UP4_CAGCATAAAGAGGCGTAAAT
  • References

    Research papers

  • 32469310