SubtiBank SubtiBank
rnaC
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rnaC

small RNA, controls AbrB expression
locus
new_2773764_2773889
pI
0.00
mw
0.00 kDa
gene length
126 bp Sequence Blast
function
control of [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]-mediated heterogeneity
product
small RNA, controls [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB] expression
essential
no
synonyms
S1022
Outlinks
KEGGBsubCycExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.9|NcRNA] → [category|SW 6.9.5|Regulatory RNAs]

    • Gene

    Coordinates
    2,773,764 → 2,773,889

    Phenotypes of a mutant

  • increased growth yield on minimal media [Pubmed|25790031]
  • increased levels of [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB] [Pubmed|25790031]

    • The protein

    Catalyzed reaction/ biological activity

  • forms a hybrid with the ''[gene|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]'' mRNA to trigger its degradation [Pubmed|25790031]

    • [SW|Interactions]

  • [protein|BECA96CF7ABCBB3DB9AED0B2204BBE03EB4B2CD7|RnaC]-mRNA of ''[gene|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]'' [Pubmed|25790031]

    • Expression and Regulation

    Operons

    genes
    [gene|BECA96CF7ABCBB3DB9AED0B2204BBE03EB4B2CD7|rnaC]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD]: sigma factor, [Pubmed|22383849], in [regulon|7024E4162A6D827069F882FDEACA696EBC05DD40|SigD regulon]
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    References

    Reviews

  • 32850966

    • Research papers

  • 25790031,22383849