SubtiBank SubtiBank
ylmH
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ylmH

unknown
locus
BSU_15410
pI
7.04
mw
28.92 kDa
protein length
257 aa Sequence Blast
gene length
774 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]
  • Gene

    Coordinates
    1,611,654 → 1,612,427

    The protein

    Protein family

  • [SW|S4 RNA-binding domain] superfamily (according to http://www.ebi.ac.uk/interpro/entry/IPR036986 Interpro)
  • [SW|Domains]

  • [SW|S4 RNA-binding domain] (aa 181-251) (according to UniProt)
  • Structure

  • [PDB|2FPH] (from Streptococcus pneumoniae, N-terminal domain, corresponds to aa 4 ... 158, 32% identity)
  • Expression and Regulation

    Operons

    genes
    [gene|ECCE99438DBFC52DA7236CB4F6486DD004CADF73|ylmD]-[gene|31789A170CB624BF8210C915F40007F802F5C81B|ylmE]-[gene|DB09F1C36257F511A84A083967A25A9D46744D14|sepF]-[gene|2B2D285D5A8F160808A21DCF07BDB924365970C5|ylmG]-[gene|BD5ACF930DD63E258D71569326752C9A1D7B9324|ylmH]
    description
    [Pubmed|16420366]

    regulatory mechanism

  • [protein|2C54FE2ADC82FF414D732018C90649D477A925AD|Spo0A]: repression, [Pubmed|14651647], in [regulon|2C54FE2ADC82FF414D732018C90649D477A925AD|Spo0A regulon]
  • regulation

  • repressed under conditions that trigger sporulation ([SW|Spo0A]) [Pubmed|14651647]
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    Biological materials

    Mutant

  • MGNA-B364 (ylmH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1363 NBRP B. subtilis, Japan]
  • BKE15410 (Δ[gene|BD5ACF930DD63E258D71569326752C9A1D7B9324|ylmH]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE15410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGTCTTTCCCTTCTATG, downstream forward: _UP4_TAGTCGGTTTTTCAGTTTTT
  • BKK15410 (Δ[gene|BD5ACF930DD63E258D71569326752C9A1D7B9324|ylmH]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK15410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGTCTTTCCCTTCTATG, downstream forward: _UP4_TAGTCGGTTTTTCAGTTTTT
  • References

  • 14651647,16420366