You are currently viewing an outdated version of
SubtiWiki.
Please use
the newest version!
ykfD [2017-8-11 16:0:3]
similar to oligopeptide [SW|ABC transporter ](permease)
Genomic Context
categories
[category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.1|Importers] → [category|SW 1.2.1.1.3|Uptake of peptides][category|SW 2|Metabolism] → [category|SW 2.3|Amino acid/ nitrogen metabolism] → [category|SW 2.3.3|Utilization of nitrogen sources other than amino acids] → [category|SW 2.3.3.4|Utilization of peptides][category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]Gene
Coordinates
1,368,844 → 1,369,833
The protein
Protein family
[SW|ABC transporter] domain (according to Swiss-Prot)Paralogous protein(s)
[protein|B88A88B4792FFFF4E1609B1FC91AAE6DBA339044|AppF], [protein|38AD697B6C9967B8BD7496E31264A21F6D0A9DEE|OppF]Structure
[PDB|4FWI] (dipeptide transporter from ''Thermoanaerobacter tengcongensis'', 36% identity) [Pubmed|23385461][SW|Localization]
attached to the cell membrane (via [protein|062AE5FB4C778178A7F6833CB8BD9D631E461E89|DppB]-[protein|EDF8D2C49FA5552B24135E12524F9035E1E01473|DppC]) [Pubmed|10092453]Biological materials
Mutant
MGNA-A743 (ykfD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/743 NBRP B. subtilis, Japan]References
12618455,10092453,23385461