SubtiBank SubtiBank
yvgT
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yvgT

potential TRIC transporter
locus
BSU_33460
pI
8.87
mw
21.57 kDa
protein length
202 aa Sequence Blast
gene length
609 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • Gene

    Coordinates
    3,436,849 3,437,457

    The protein

    Protein family

  • UPF0126 family (single member, according to UniProt)
  • Structure

  • [PDB|5WTR] (from Saccharolobus solfataricus, 37% identity)
  • [SW|Localization]

  • cell membrane (according to UniProt)
  • Expression and Regulation

    Operons

    genes
    [gene|ADF4EDD1C84ABF374DD3DBBAA41539F5874F4926|yvgT]
    description
    [Pubmed|22383849]

    regulatory mechanism

  • [protein|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|TnrA]: repression, [Pubmed|25755103], in [regulon|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|TnrA regulon]
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    Biological materials

    Mutant

  • MGNA-A457 (yvgT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/457 NBRP B. subtilis, Japan]
  • BKE33460 ([gene|ADF4EDD1C84ABF374DD3DBBAA41539F5874F4926|yvgT]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33460 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTGATGACTCCCTTTT, downstream forward: _UP4_TAATAGCAAAAAAACCGATT
  • BKK33460 ([gene|ADF4EDD1C84ABF374DD3DBBAA41539F5874F4926|yvgT]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33460 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTGATGACTCCCTTTT, downstream forward: _UP4_TAATAGCAAAAAAACCGATT
  • References

  • 21519847,25755103