SubtiBank SubtiBank
ywcA [Tue Dec 13 2016 11:16:37 GMT+0100 (CET)]
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ywcA [Tue Dec 13 2016 11:16:37 GMT+0100 (CET)]

similar to Na+-dependent acetate symporter
locus
BSU38240
pI
7.20
mw
54.00 kDa
function
unknown
product
unknown
essential
no
synonyms
ipa-31r

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.1|Amino acid transporters] → [category|SW 1.2.4.1.1|Solute:sodium symporter family]
  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.1|Amino acid transporters] → [category|SW 1.2.4.1.7|Sodium-solute symporter]
  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|transporters/ other], [SW|membrane proteins], [SW|sporulation proteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|SigE regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    3,924,225 -> 3,925,766

    Phenotypes of a mutant

  • ''[protein|search|ywcB]-[protein|search|ywcA]'' mutant has slightly reduced acetic acid transport [Pubmed|26060272]
  • ''[protein|search|ywcB]-[protein|search|ywcA]'' mutant shows earlier pellicle biofilm formation [Pubmed|26060272]
  • The protein

    Catalyzed reaction/ biological activity

  • the protein is involved in acetate transport [Pubmed|26060272]
  • the protein is not involved in proline transport [Pubmed|24142252]
  • Protein family

  • solute:sodium symporter family (SSS family)
  • [SW|Localization]

  • cell membrane (according to Swiss-Prot)
  • Expression and Regulation

    Operon

  • ''[protein|search|slrA]-[protein|search|ywcB]-[protein|search|ywcA]
  • ''[protein|search|ywcB]-[protein|search|ywcA]
  • [SW|Sigma factor]

  • ''[protein|search|ywcB]'': [protein|search|SigE] [Pubmed|15699190]
  • Regulation

  • expressed during sporulation ([protein|search|SigE]) [Pubmed|15699190]
  • Biological materials

    Mutant

  • available in [SW|Erhard Bremer]'s lab [Pubmed|24142252]
  • References

  • 26060272,15699190,24142252,14563880