yraN

similar to transcriptional regulator ([SW|LysR family])

locus: BSU_26870

pI: 8.97

mw: 33.46 kDa

protein length: 289 aa

gene length: 870 bp

function: unknown

product: transcriptional regulator ([SW|LysR family])

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates: 2,745,594 2,746,463

The protein

Protein family

• [SW|LysR family] (according to UniProt)

[SW|Domains]

• [SW|HTH lysR-type domain] (aa 1-58) (according to UniProt)

Structure

• [PDB|5Z72] (B. amyloliquefaciens [protein|FE15A41A58A8177280817CA3825764C39185021A|CcpC], 36% identity)

Expression and Regulation

Operons

• genes: [gene|AD1C6BA47924F07974680E1E5591DD96BA95A98A|yraN]-[gene|5AE18B11C9E13E5B121673955E01F1B1E8DB1637|yraO]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-A262 (yraN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/262 NBRP B. subtilis, Japan]
• BKE26870 ([gene|AD1C6BA47924F07974680E1E5591DD96BA95A98A|yraN]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE26870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCATCTTCCTTTCTA, downstream forward: _UP4_TAAAGTTATGATAGAATTTT
• BKK26870 ([gene|AD1C6BA47924F07974680E1E5591DD96BA95A98A|yraN]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK26870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCATCTTCCTTTCTA, downstream forward: _UP4_TAAAGTTATGATAGAATTTT

References

• 22383849