SubtiBank SubtiBank
yydA [Tue Dec 13 2016 11:16:37 GMT+0100 (CET)]
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yydA [Tue Dec 13 2016 11:16:37 GMT+0100 (CET)]

similar to pseudouridine methyltransferase
locus
BSU40230
pI
9.31
mw
17.00 kDa
function
may be involved in maturation of 23S rRNA
product
similar to pseudouridine methyltransferase
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.3|rRNA modification and maturation/ based on similarity]
  • [SW|Categories] containing this gene/protein

  • [SW|translation]
  • This gene is a member of the following [SW|regulons]

  • [SW|DnaA regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    4,134,436 -> 4,134,915

    The protein

    Catalyzed reaction/ biological activity

  • S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N3-methylpseudouridine (according to Swiss-Prot)
  • Protein family

  • RNA methyltransferase rlmH family (according to Swiss-Prot)
  • Structure

  • [PDB|1TO0]
  • Expression and Regulation

    Regulatory mechanism

  • [protein|search|DnaA]: transcription repression [Pubmed|17932079]
  • References

  • 17932079,18755836,18755835,20817755