SubtiBank SubtiBank
yfkS
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yfkS

D protein for the [protein|7CE0CAF27B1C0F507E783B8B80622270B00634FD|YfkQ]-[protein|B7EEC1910715507596734540D24B3C93B4B7065F|YfkR]-[protein|7A62875A659B9F0967C392F38895D9E15A29D559|YfkT] germinant receptor of unknown specificity, general stress protein, survival of ethanol and paraquat stresses
locus
BSU_07770
pI
10.01
mw
7.67 kDa
protein length
gene length
201 bp Sequence Blast
function
germination, survival of of stress conditions
product
D protein for the [protein|7CE0CAF27B1C0F507E783B8B80622270B00634FD|YfkQ]-[protein|B7EEC1910715507596734540D24B3C93B4B7065F|YfkR]-[protein|7A62875A659B9F0967C392F38895D9E15A29D559|YfkT] germinant receptor
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.5|Germination/ based on similarity]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.8|Resistance against oxidative and electrophile stress]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • Gene

    Coordinates
    847,282 847,482

    The protein

    [SW|Localization]

  • membrane (according to UniProt)
  • Expression and Regulation

    Operons

    genes
    [gene|7CE0CAF27B1C0F507E783B8B80622270B00634FD|yfkQ]-[gene|B7EEC1910715507596734540D24B3C93B4B7065F|yfkR]-[gene|AA76BEF6A4CECB5D3910918E8D91D8B919EDEA7E|yfkS]-[gene|7A62875A659B9F0967C392F38895D9E15A29D559|yfkT]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|15699190], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]
  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]
  • regulation

  • expressed during [SW|sporulation] in the forespore [Pubmed|15699190]
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    Biological materials

    Mutant

  • MGNA-C344 (yfkS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2342 NBRP B. subtilis, Japan]
  • BKE07770 ([gene|AA76BEF6A4CECB5D3910918E8D91D8B919EDEA7E|yfkS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE07770 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCTGACGCACCTCCATT, downstream forward: _UP4_TGAACATGACAGAAAGGATG
  • BKK07770 ([gene|AA76BEF6A4CECB5D3910918E8D91D8B919EDEA7E|yfkS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK07770 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCTGACGCACCTCCATT, downstream forward: _UP4_TGAACATGACAGAAAGGATG
  • References

  • 15699190,22383849,10762253,15805528,23625846,22582280