yvnA

unknown

locus: BSU_35050

pI: 10.06

mw: 18.10 kDa

protein length: 157 aa

gene length: 474 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 3,602,074 3,602,547

The protein

[SW|Domains]

• [SW|HTH marR-type domain] (aa 6-157) (according to UniProt)

[SW|Localization]

• cytoplasm (according to Swiss-Prot)

Expression and Regulation

Operons

• genes: [gene|A58CB284AC04FBFD1EEF6D8DC1BB37E095E2B4FC|yvnA]

  regulatory mechanism

  • [protein|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA]: repression, [Pubmed|12850135], in [regulon|E39AFEB7B7F28969A35C4B51CC6E7819F71C79D9|CcpA regulon]
  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

  regulation

  • repressed by glucose (7-fold) ([protein|search|CcpA]) [Pubmed|12850135], subject to carbon catabolite repression (7-fold: [protein|search|CcpA]) [Pubmed|12850135]

Biological materials

Mutant

• MGNA-A334 (yvnA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/334 NBRP B. subtilis, Japan]
• BKE35050 ([gene|A58CB284AC04FBFD1EEF6D8DC1BB37E095E2B4FC|yvnA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE35050 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCAATTTGCCTCTCTGAT, downstream forward: _UP4_TAAAAAGAGTCTCACCCGCA
• BKK35050 ([gene|A58CB284AC04FBFD1EEF6D8DC1BB37E095E2B4FC|yvnA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK35050 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCAATTTGCCTCTCTGAT, downstream forward: _UP4_TAAAAAGAGTCTCACCCGCA

References

• 12850135,20817675