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yvdQ

putative spore coat protein

locus: BSU34510

pI: 5.81

mw: 18.44 kDa

protein length: 170 aa

gene length: 513 bp

function: protection of the spore

product: putative spore coat protein

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.2|Spore coat protein/ based on similarity]
• [category|SW 6|Groups of genes] → [category|SW 6.11|Efp-dependent proteins]

Gene

Coordinates: 3,542,179 3,542,691

The protein

Structure

• [PDB|2RBD] (from B. halodurans, 57% identity)

Expression and Regulation

Operons

• genes: [gene|A0392469FB5B36C030C003ECC0EC39F71BBC5CD0|yvdQ]
  description: [Pubmed|16497325]

  sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [Pubmed|16497325], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]

  regulation

  • expressed during sporulation in the forespore ([protein|search|SigG]) [Pubmed|16497325]

  additional information

  • [protein|search|translation] is likely to require [protein|search|Efp] due to the presence of several consecutive proline residues [PubMed|23239624,23239623]

Biological materials

Mutant

• MGNA-B619 (yvdQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1618 NBRP B. subtilis, Japan]
• BKE34510 ([gene|A0392469FB5B36C030C003ECC0EC39F71BBC5CD0|yvdQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34510 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCTCATTCTCCTCCCAT, downstream forward: _UP4_TAATGGCAAAGGCATATACA
• BKK34510 ([gene|A0392469FB5B36C030C003ECC0EC39F71BBC5CD0|yvdQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34510 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCTCATTCTCCTCCCAT, downstream forward: _UP4_TAATGGCAAAGGCATATACA

References

• 16497325