SubtiBank SubtiBank
yqxK [2018-12-09 17:25:53]
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yqxK [2018-12-09 17:25:53]

similar to lesion-specific endonuclease EndoQ
locus
BSU23600
pI
8.45
mw
32.03 kDa
protein length
294 aa Sequence Blast
gene length
882 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
yqkH
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.6|DNA repair/ recombination/ based on similarity]

    • Gene

    Coordinates
    2,457,349 → 2,458,512

    The protein

    Structure

  • [PDB|5ZB8] (from Pyrococcus furiosus, 34% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|CF38BE04F04919BB304789E9B3FE489385E468E6|nudF]-[gene|9D05B104000EED08FB62D6F362FC5E9C2A5354D9|yqxK]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • BKE23600 (Δ[gene|9D05B104000EED08FB62D6F362FC5E9C2A5354D9|yqxK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTGCAAATCCGCGTAAATCT, downstream forward: _UP4_AAAATTAAACCGTGAGCTAA
  • BKK23600 (Δ[gene|9D05B104000EED08FB62D6F362FC5E9C2A5354D9|yqxK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTGCAAATCCGCGTAAATCT, downstream forward: _UP4_AAAATTAAACCGTGAGCTAA