ybdN

unknown

locus: BSU_02040

pI: 8.80

mw: 31.35 kDa

protein length: 285 aa

gene length: 858 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 224,075 224,932

The protein

[SW|Localization]

• extracellular (signal peptide) [Pubmed|18957862]

Expression and Regulation

Operons

• genes: [gene|9C9F5F02DE6E08986072307EED78A931672AC642|ybdN]

  regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|18840696], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

  regulation

  • repressed during logarithmic growth ([protein|search|AbrB]) [Pubmed|18840696]

Biological materials

Mutant

• MGNA-B959 (ybdN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1958 NBRP B. subtilis, Japan]
• BKE02040 ([gene|9C9F5F02DE6E08986072307EED78A931672AC642|ybdN]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCAAACAACCTCCTTTT, downstream forward: _UP4_TAACTTATACCGAGCCGGTT
• BKK02040 ([gene|9C9F5F02DE6E08986072307EED78A931672AC642|ybdN]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCAAACAACCTCCTTTT, downstream forward: _UP4_TAACTTATACCGAGCCGGTT

References

• 18957862,18840696,20709850