SubtiBank SubtiBank
pelC [2017-8-11 16:0:3]
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pelC [2017-8-11 16:0:3]

pectate lyase C
locus
BSU34950
pI
9.14
mw
24.13 kDa
protein length
221 aa Sequence Blast
gene length
663 bp Sequence Blast
function
degradation of polygalacturonic acid
product
pectate lyase C
essential
no
ec
4.2.2.2
synonyms
yvpA

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.27|Utilization of other polymeric carbohydrates]
  • [category|SW 6|Groups of genes] → [category|SW 6.12|Secreted proteins]
  • Gene

    Coordinates
    3,590,603 → 3,591,268

    The protein

    Catalyzed reaction/ biological activity

  • Eliminative cleavage of (1→4)-alpha-D-galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at their non-reducing ends (according to Swiss-Prot)
  • Protein family

  • polysaccharide lyase 3 family (according to Swiss-Prot)
  • [SW|Localization]

  • extracellular (signal peptide) [Pubmed|18957862]
  • Expression and Regulation

    Operons

    genes
    [gene|950D355D993DF79AD5288A00AA04A775637AC04D|yvpB]-[gene|99ECA1B305145A63BD3A72094EF24F56D875BCC1|pelC]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A382 (yvpA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/382 NBRP B. subtilis, Japan]
  • References

  • 18957862,16514142,20525796,24236123